!**********************Note: lines staring with "!" are remarks and will be ignored in the program******************** !****************************************** General Information ****************************************************** !Assuming F1 = P1 x P2, populations available in QTL IciMapping are: ! 1, P1BC1F1 = P1 x F1, the first backcrossing where P1 is used as the recurrent parent; ! 2, P2BC1F1 = P2 x F1, the first backcrossing where P2 is used as the recurrent parent; ! 3, F1DH, F1-derived doubled haploids; ! 4, RIL or F1RIL, recombinant inbred lines through the repeated selfing of F1; ! 5, P1BC1RIL, recombinant inbred lines through the repeated selfing of P1BC1F1; ! 6, P2BC1RIL, recombinant inbred lines through the repeated selfing of P2BC1F1; ! 7, F2, the selfing generation of F1; ! 8, F3, the selfing generation of F2; ! 9, P1BC2F1, the second backcrossing where P1 is used as the recurrent parent; ! 10, P2BC2F1, the second backcrossing where P2 is used as the recurrent parent; ! 11, P1BC2RIL, recombinant inbred lines through the repeated selfing of P1BC2F1; ! 12, P2BC2RIL, recombinant inbred lines through the repeated selfing of P2BC2F1; ! 13, P1BC1F2, the selfing generation of P1BC1F1; ! 14, P2BC1F2, the selfing generation of P2BC1F1; ! 15, P1BC2F2, the selfing generation of P1BC2F1; ! 16, P2BC2F2, the selfing generation of P2BC2F1; ! 17, P1BC1DH, P1BC1F1-derived doubled haploids; ! 18, P2BC1DH, P2BC1F1-derived doubled haploids; ! 19, P1BC2DH, P1BC2F1-derived doubled haploids; ! 20, P2BC2DH, P2BC2F1-derived doubled haploids; 1 !Indicator: 1 for mapping; 2 for simulation 4 !Mapping Population Type 1 !Mapping Function (1 for Kosambi; 2 for Haldane; 3 for Morgan) 2 !Marker Space Type (1 for intervals; 2 for positions) 1 !Marker Space Unit(1 for centiMorgan; 2 for Morgan) 20 !Number of Chromosomes (or Linkage Groups) 226 !Size of the mapping population 1 !Number of traits !***************************************** Chromosomes and Linkage Maps ********************************************** !Chromosome; NumMarkers Chromosome1 54 Chromosome2 84 Chromosome3 80 Chromosome4 72 Chromosome5 77 Chromosome6 89 Chromosome7 52 Chromosome8 77 Chromosome9 76 Chromosome10 57 Chromosome11 45 Chromosome12 58 Chromosome13 61 Chromosome14 51 Chromosome15 65 Chromosome16 77 Chromosome17 60 Chromosome18 91 Chromosome19 89 Chromosome20 68 !MarkerName; Chromosome; position or interval as indicated by General Information Bin_1_1144296 1 0 Bin_1_2316557 1 7.733 Bin_1_2529821 1 8.6677 Bin_1_3371680 1 10.5734 Bin_1_4083212 1 22.7398 Bin_1_4299804 1 23.2028 Bin_1_4761397 1 23.6657 Bin_1_5096644 1 24.3602 Bin_1_5321085 1 24.5896 Bin_1_6199346 1 24.5896 Bin_1_8897534 1 25.5156 Bin_1_11346193 1 28.9356 Bin_1_12905503 1 29.1649 Bin_1_15185822 1 29.1649 Bin_1_21823442 1 29.1649 Bin_1_27529432 1 34.4344 Bin_1_30224839 1 34.6606 Bin_1_33110420 1 34.8869 Bin_1_34541239 1 36.2826 Bin_1_36293488 1 36.5098 Bin_1_37472242 1 37.198 Bin_1_37991200 1 38.3556 Bin_1_39031257 1 38.5828 Bin_1_41607553 1 38.8101 Bin_1_43550578 1 41.9697 Bin_1_43980319 1 42.6641 Bin_1_44499433 1 42.8935 Bin_1_45828226 1 43.1229 Bin_1_47339796 1 47.6351 Bin_1_48053088 1 48.8035 Bin_1_48489351 1 50.4551 Bin_1_48928224 1 55.2194 Bin_1_49145168 1 56.1498 Bin_1_49434698 1 60.9141 Bin_1_49707109 1 61.1435 Bin_1_49890504 1 61.3729 Bin_1_50041183 1 61.6022 Bin_1_50175508 1 63.2616 Bin_1_50314061 1 63.9626 Bin_1_50516364 1 64.1941 Bin_1_50732768 1 71.3477 Bin_1_50849304 1 71.8129 Bin_1_50969779 1 72.0444 Bin_1_51217215 1 72.5095 Bin_1_51454900 1 73.9317 Bin_1_52074632 1 74.1632 Bin_1_52737077 1 76.078 Bin_1_52947912 1 76.5431 Bin_1_53242742 1 77.2441 Bin_1_53571959 1 77.9451 Bin_1_54024197 1 78.1766 Bin_1_54401478 1 78.408 Bin_1_54520025 1 82.3966 Bin_1_54630015 1 83.8188 Bin_2_347681 2 0 Bin_2_1017335 2 1.8788 Bin_2_1426169 2 7.7132 Bin_2_1691217 2 8.1699 Bin_2_2141837 2 9.7984 Bin_2_2633184 2 10.9506 Bin_2_2917696 2 11.1769 Bin_2_3037383 2 11.4031 Bin_2_3207409 2 11.6294 Bin_2_3356229 2 11.8556 Bin_2_3583040 2 16.2789 Bin_2_3860515 2 16.9639 Bin_2_4056006 2 17.1901 Bin_2_4254421 2 19.5504 Bin_2_4415649 2 19.7766 Bin_2_4870570 2 20.0028 Bin_2_5301034 2 20.9204 Bin_2_5512294 2 21.8337 Bin_2_6163368 2 22.059 Bin_2_6710835 2 22.059 Bin_2_6800048 2 25.7421 Bin_2_6895785 2 25.9714 Bin_2_6997378 2 27.3737 Bin_2_7365406 2 27.602 Bin_2_7959329 2 27.8303 Bin_2_8278841 2 28.0586 Bin_2_8639140 2 28.2869 Bin_2_9010774 2 28.9782 Bin_2_9252919 2 28.9782 Bin_2_9556484 2 29.2076 Bin_2_9774931 2 29.4369 Bin_2_10017661 2 29.6663 Bin_2_11053284 2 31.0751 Bin_2_12096885 2 31.0751 Bin_2_12349054 2 32.249 Bin_2_13294815 2 32.7142 Bin_2_14319279 2 47.502 Bin_2_14520329 2 48.1997 Bin_2_14654867 2 48.4302 Bin_2_14776293 2 48.6606 Bin_2_14909863 2 48.891 Bin_2_15041036 2 49.1214 Bin_2_15290061 2 49.1214 Bin_2_15544427 2 52.8045 Bin_2_15684075 2 53.2654 Bin_2_15863092 2 54.4393 Bin_2_16648738 2 54.9023 Bin_2_22678601 2 55.1327 Bin_2_28972767 2 55.1327 Bin_2_33418683 2 63.8212 Bin_2_37976706 2 64.0506 Bin_2_39886104 2 64.5115 Bin_2_40893901 2 71.9339 Bin_2_41135148 2 72.3948 Bin_2_41197386 2 72.6241 Bin_2_41315540 2 73.085 Bin_2_41778473 2 73.3143 Bin_2_42237211 2 79.2088 Bin_2_42390916 2 79.4382 Bin_2_42487543 2 83.1213 Bin_2_42594434 2 85.527 Bin_2_42706648 2 85.7574 Bin_2_42815735 2 86.4552 Bin_2_42970344 2 86.6845 Bin_2_43422589 2 86.9139 Bin_2_43893134 2 88.8196 Bin_2_44013407 2 89.0489 Bin_2_44118789 2 91.1931 Bin_2_44296384 2 91.8876 Bin_2_44609225 2 92.117 Bin_2_44873645 2 94.0136 Bin_2_44929042 2 94.2419 Bin_2_45041964 2 94.4702 Bin_2_45186731 2 94.6985 Bin_2_45266023 2 94.9268 Bin_2_45489694 2 95.1552 Bin_2_45840129 2 98.8202 Bin_2_46323069 2 99.7463 Bin_2_46801545 2 102.129 Bin_2_47042683 2 105.7941 Bin_2_47203508 2 106.4854 Bin_2_47326711 2 107.4114 Bin_2_47392450 2 107.6397 Bin_2_47734863 2 107.868 Bin_3_547697 3 0 Bin_3_1253639 3 0.4608 Bin_3_1474132 3 0.6902 Bin_3_1572241 3 0.9196 Bin_3_1808109 3 4.8686 Bin_3_2104960 3 8.5518 Bin_3_2357270 3 10.6858 Bin_3_2629360 3 11.6118 Bin_3_2767999 3 11.8401 Bin_3_2900764 3 12.0684 Bin_3_3031858 3 12.7597 Bin_3_3080945 3 12.988 Bin_3_3369849 3 13.4467 Bin_3_3647874 3 13.675 Bin_3_3971663 3 13.9034 Bin_3_4805339 3 14.1317 Bin_3_5365517 3 16.0194 Bin_3_5546188 3 16.2466 Bin_3_6072520 3 16.4739 Bin_3_6494622 3 16.7012 Bin_3_6618372 3 22.823 Bin_3_12097675 3 23.0502 Bin_3_17669304 3 23.2775 Bin_3_17968404 3 23.5048 Bin_3_18897316 3 23.9614 Bin_3_19803540 3 30.4071 Bin_3_23439253 3 31.3332 Bin_3_28243785 3 31.5615 Bin_3_30295045 3 31.7888 Bin_3_31567291 3 32.016 Bin_3_32381149 3 32.016 Bin_3_32834918 3 32.2423 Bin_3_33457443 3 32.4685 Bin_3_34104446 3 35.3288 Bin_3_34329367 3 38.9583 Bin_3_34623409 3 39.4108 Bin_3_34904871 3 40.5578 Bin_3_34990010 3 42.4192 Bin_3_35208431 3 42.6444 Bin_3_35464197 3 43.7914 Bin_3_35615481 3 44.2439 Bin_3_35713903 3 45.3961 Bin_3_35763004 3 45.6224 Bin_3_35815408 3 46.077 Bin_3_35889386 3 46.3032 Bin_3_36040142 3 46.5305 Bin_3_36171457 3 49.1519 Bin_3_36340895 3 49.6086 Bin_3_36573747 3 50.0652 Bin_3_36810915 3 50.2925 Bin_3_37153032 3 54.7376 Bin_3_37409005 3 57.8667 Bin_3_37477607 3 58.3233 Bin_3_37609656 3 58.5506 Bin_3_37954684 3 58.7779 Bin_3_38269307 3 62.461 Bin_3_38408563 3 62.6904 Bin_3_38641835 3 63.1512 Bin_3_38919239 3 63.6121 Bin_3_39035881 3 63.6121 Bin_3_39317409 3 65.4997 Bin_3_39898759 3 66.4258 Bin_3_40576368 3 69.3136 Bin_3_41168170 3 73.5315 Bin_3_41830713 3 76.4333 Bin_3_42429627 3 76.8941 Bin_3_42997961 3 86.2929 Bin_3_43477710 3 87.7151 Bin_3_43705966 3 89.1373 Bin_3_43969785 3 90.0763 Bin_3_44116050 3 94.1051 Bin_3_44242115 3 94.3377 Bin_3_44380789 3 94.805 Bin_3_44453985 3 96.729 Bin_3_44637415 3 97.1942 Bin_3_44807085 3 97.4257 Bin_3_44974263 3 97.4257 Bin_3_45194384 3 97.8908 Bin_3_45325207 3 98.1223 Bin_3_45491522 3 98.3538 Bin_4_2390551 4 0 Bin_4_5027981 4 22.216 Bin_4_5546346 4 24.1587 Bin_4_5849393 4 27.3971 Bin_4_6015782 4 27.6318 Bin_4_6206942 4 28.1035 Bin_4_6308179 4 28.3383 Bin_4_6417675 4 30.281 Bin_4_6626168 4 31.4831 Bin_4_6789033 4 35.0065 Bin_4_6926044 4 35.7175 Bin_4_7118893 4 36.4318 Bin_4_7259025 4 37.3889 Bin_4_7587921 4 37.8628 Bin_4_7920719 4 38.8199 Bin_4_8042847 4 39.7634 Bin_4_8126955 4 40.7069 Bin_4_8220341 4 40.9384 Bin_4_8321164 4 41.171 Bin_4_8454432 4 41.4035 Bin_4_8661414 4 43.0868 Bin_4_8823207 4 43.0868 Bin_4_8894270 4 44.0259 Bin_4_8970678 4 44.0259 Bin_4_9070967 4 44.7236 Bin_4_9168655 4 45.1866 Bin_4_9284869 4 45.8843 Bin_4_9408307 4 50.1233 Bin_4_9491797 4 51.5321 Bin_4_9575209 4 52.2266 Bin_4_12608005 4 59.3803 Bin_4_15605346 4 59.6118 Bin_4_16748047 4 59.6118 Bin_4_18007732 4 59.6118 Bin_4_19383181 4 59.8412 Bin_4_27564059 4 60.0705 Bin_4_37247865 4 60.5314 Bin_4_40602972 4 60.9922 Bin_4_41299189 4 61.2216 Bin_4_41458268 4 61.2216 Bin_4_41559859 4 68.5656 Bin_4_41868656 4 69.2569 Bin_4_42266244 4 69.4852 Bin_4_42761392 4 69.7135 Bin_4_43581115 4 69.7135 Bin_4_44183194 4 75.0096 Bin_4_45093466 4 75.2379 Bin_4_45962072 4 86.6029 Bin_4_46452864 4 92.4672 Bin_4_46871699 4 92.6955 Bin_4_47063864 4 96.3605 Bin_4_47233161 4 96.3605 Bin_4_47361134 4 96.5878 Bin_4_47658314 4 97.0424 Bin_4_47876103 4 100.6896 Bin_4_48053005 4 100.9179 Bin_4_48253885 4 104.867 Bin_4_48314256 4 105.0964 Bin_4_48384330 4 105.3257 Bin_4_48572603 4 105.3257 Bin_4_48849111 4 106.9851 Bin_4_49045421 4 108.4006 Bin_4_49154318 4 108.631 Bin_4_49258968 4 108.8614 Bin_4_49365964 4 109.3244 Bin_4_49510847 4 110.0221 Bin_4_49642419 4 110.4808 Bin_4_49972945 4 110.7102 Bin_4_50301267 4 111.4047 Bin_4_50376757 4 111.634 Bin_4_50433884 4 112.0949 Bin_4_51109963 4 116.3128 Bin_5_312703 5 0 Bin_5_767304 5 0.2326 Bin_5_1124800 5 0.4651 Bin_5_1453684 5 1.6502 Bin_5_1825208 5 3.3254 Bin_5_2125976 5 14.891 Bin_5_2265767 5 15.1236 Bin_5_2452027 5 15.3562 Bin_5_2566388 5 15.5887 Bin_5_2653934 5 17.264 Bin_5_2755059 5 17.7313 Bin_5_2821541 5 18.1986 Bin_5_3063120 5 18.4312 Bin_5_3410104 5 21.6375 Bin_5_3607657 5 23.0597 Bin_5_4029746 5 23.2901 Bin_5_4409067 5 27.8251 Bin_5_4557774 5 28.2903 Bin_5_5006425 5 29.4697 Bin_5_5370267 5 31.6345 Bin_5_5513707 5 31.866 Bin_5_6701635 5 32.3311 Bin_5_8769235 5 46.524 Bin_5_10091462 5 46.524 Bin_5_18869145 5 46.7565 Bin_5_27509997 5 47.2238 Bin_5_27823314 5 47.4564 Bin_5_27992511 5 47.9237 Bin_5_28228158 5 48.1563 Bin_5_28779672 5 48.6236 Bin_5_29179073 5 48.8572 Bin_5_30223993 5 49.0908 Bin_5_31290093 5 50.293 Bin_5_31511850 5 50.293 Bin_5_31865874 5 53.564 Bin_5_32451279 5 55.0207 Bin_5_33045943 5 60.5114 Bin_5_33336585 5 61.2258 Bin_5_33635440 5 61.4616 Bin_5_33900480 5 61.4616 Bin_5_34086730 5 65.2376 Bin_5_34296665 5 67.1524 Bin_5_34409014 5 67.3839 Bin_5_34443104 5 68.0816 Bin_5_34564594 5 68.312 Bin_5_34686911 5 69.0098 Bin_5_34811744 5 69.2402 Bin_5_35020919 5 69.7032 Bin_5_35222589 5 71.1186 Bin_5_35360415 5 71.1186 Bin_5_35454656 5 71.5795 Bin_5_35541898 5 71.8088 Bin_5_35640827 5 71.8088 Bin_5_35858379 5 72.5001 Bin_5_36109901 5 76.718 Bin_5_36423689 5 76.9463 Bin_5_36843878 5 85.5875 Bin_5_37074854 5 86.282 Bin_5_37114510 5 88.6762 Bin_5_37252454 5 88.9045 Bin_5_37435708 5 89.3632 Bin_5_37527938 5 89.5915 Bin_5_37655177 5 94.6083 Bin_5_37959016 5 94.8366 Bin_5_38205122 5 95.2953 Bin_5_38274638 5 103.2567 Bin_5_38388250 5 103.485 Bin_5_38559676 5 104.1763 Bin_5_38668289 5 104.4046 Bin_5_38765725 5 104.4046 Bin_5_38866880 5 104.6319 Bin_5_39094587 5 107.7609 Bin_5_39511177 5 107.9882 Bin_5_40114022 5 108.6763 Bin_5_40702092 5 108.9036 Bin_5_41057393 5 109.1309 Bin_5_41572158 5 109.3581 Bin_6_1666137 6 0 Bin_6_3348498 6 0.6881 Bin_6_3445711 6 0.9154 Bin_6_3725208 6 1.1427 Bin_6_3958460 6 1.5993 Bin_6_4170077 6 2.0559 Bin_6_5031085 6 2.2832 Bin_6_5895019 6 14.2378 Bin_6_6376366 6 14.6923 Bin_6_7005803 6 14.9186 Bin_6_7536246 6 16.3078 Bin_6_7885992 6 25.8299 Bin_6_8126684 6 27.974 Bin_6_8377059 6 29.3895 Bin_6_8817597 6 29.3895 Bin_6_9438483 6 31.5337 Bin_6_9837614 6 31.7631 Bin_6_10021381 6 31.9924 Bin_6_10248956 6 32.2218 Bin_6_10386119 6 32.4511 Bin_6_10634418 6 32.912 Bin_6_10942546 6 33.3728 Bin_6_11095535 6 33.8337 Bin_6_11244437 6 33.8337 Bin_6_11499211 6 36.7496 Bin_6_11716876 6 45.1614 Bin_6_12508001 6 46.8208 Bin_6_13276990 6 59.4383 Bin_6_13345285 6 59.9012 Bin_6_13531741 6 60.1317 Bin_6_13872588 6 60.3621 Bin_6_14084736 6 62.7678 Bin_6_14123629 6 62.9982 Bin_6_14218229 6 62.9982 Bin_6_14355151 6 63.9373 Bin_6_14843875 6 64.4002 Bin_6_15306960 6 74.4793 Bin_6_15481463 6 74.7108 Bin_6_15661235 6 75.6455 Bin_6_16105459 6 75.6455 Bin_6_16592394 6 77.0543 Bin_6_16728443 6 77.2826 Bin_6_16837641 6 77.5109 Bin_6_17057016 6 78.437 Bin_6_17388034 6 80.571 Bin_6_17636228 6 80.7993 Bin_6_17771852 6 81.4906 Bin_6_17869816 6 81.7189 Bin_6_18376846 6 81.9472 Bin_6_19008574 6 82.1755 Bin_6_19241645 6 82.8668 Bin_6_19386006 6 82.8668 Bin_6_19671441 6 83.0962 Bin_6_19966688 6 83.3266 Bin_6_20517793 6 83.557 Bin_6_25130447 6 83.557 Bin_6_32364629 6 83.7896 Bin_6_37020054 6 84.0221 Bin_6_40009242 6 84.4894 Bin_6_41769350 6 84.722 Bin_6_42992894 6 84.9556 Bin_6_44203597 6 85.4229 Bin_6_44881735 6 85.4229 Bin_6_45323463 6 85.4229 Bin_6_45672240 6 85.8859 Bin_6_46227165 6 86.3489 Bin_6_46633431 6 86.5793 Bin_6_46792513 6 86.5793 Bin_6_47047946 6 86.8086 Bin_6_47317574 6 87.038 Bin_6_47481747 6 87.2674 Bin_6_47810526 6 87.7282 Bin_6_48146105 6 88.4227 Bin_6_48390180 6 89.1172 Bin_6_48545387 6 91.0138 Bin_6_48629102 6 94.1581 Bin_6_48732067 6 95.0798 Bin_6_48799240 6 95.3071 Bin_6_48851328 6 95.5344 Bin_6_48920561 6 101.6562 Bin_6_49010267 6 105.043 Bin_6_49119059 6 107.4371 Bin_6_49304853 6 107.6665 Bin_6_49538622 6 108.1273 Bin_6_49679392 6 112.0764 Bin_6_49771017 6 112.3058 Bin_6_50271528 6 113.0003 Bin_6_50727109 6 116.1598 Bin_6_50963040 6 116.3892 Bin_7_147653 7 0 Bin_7_693855 7 0.2294 Bin_7_1157007 7 2.126 Bin_7_1238501 7 2.3554 Bin_7_1645941 7 2.8162 Bin_7_2250879 7 6.4993 Bin_7_2689404 7 10.7172 Bin_7_3100651 7 10.9466 Bin_7_3592328 7 11.8769 Bin_7_3941751 7 16.0948 Bin_7_4095897 7 16.3231 Bin_7_4286705 7 17.2535 Bin_7_4785575 7 17.7143 Bin_7_5363184 7 22.204 Bin_7_6051364 7 22.4333 Bin_7_6662305 7 23.8421 Bin_7_6881072 7 24.0715 Bin_7_7036778 7 24.303 Bin_7_7096757 7 24.5345 Bin_7_7373442 7 24.5345 Bin_7_7709649 7 24.7659 Bin_7_7836109 7 24.7659 Bin_7_7896108 7 25.2332 Bin_7_8157493 7 25.2332 Bin_7_8435625 7 25.4669 Bin_7_8559614 7 25.9364 Bin_7_8813586 7 25.9364 Bin_7_9236929 7 26.8799 Bin_7_9977423 7 27.1125 Bin_7_10538773 7 39.0484 Bin_7_13122206 7 40.7 Bin_7_15881792 7 42.3515 Bin_7_16316590 7 43.0396 Bin_7_16719976 7 47.7565 Bin_7_17020593 7 47.9838 Bin_7_17155098 7 48.4405 Bin_7_26589842 7 48.8971 Bin_7_36046154 7 80.0455 Bin_7_36200793 7 82.6922 Bin_7_36380390 7 83.1531 Bin_7_36823252 7 83.3824 Bin_7_37383985 7 84.0769 Bin_7_37736634 7 92.0811 Bin_7_38088791 7 95.2406 Bin_7_38589270 7 95.47 Bin_7_38959560 7 95.6994 Bin_7_39073671 7 98.8589 Bin_7_40361126 7 99.0883 Bin_7_41710391 7 99.5512 Bin_7_42072909 7 100.0142 Bin_7_42535893 7 105.3645 Bin_7_42952708 7 109.8767 Bin_8_783937 8 0 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Bin_18_5344292 18 34.3471 Bin_18_5743509 18 35.7494 Bin_18_6233582 18 35.9777 Bin_18_6625590 18 40.1747 Bin_18_6750444 18 41.5835 Bin_18_7187427 18 41.5835 Bin_18_7626394 18 43.7175 Bin_18_7726982 18 44.6435 Bin_18_8432369 18 44.8719 Bin_18_9204081 18 45.1002 Bin_18_9308022 18 45.3285 Bin_18_9358283 18 46.0198 Bin_18_9571504 18 46.2481 Bin_18_9858586 18 46.2481 Bin_18_12217049 18 46.7089 Bin_18_16452400 18 51.7767 Bin_18_18469514 18 54.4362 Bin_18_19135939 18 54.6666 Bin_18_20137743 18 54.6666 Bin_18_31275111 18 57.5968 Bin_18_43520066 18 57.5968 Bin_18_45029143 18 57.5968 Bin_18_45884099 18 57.5968 Bin_18_47609574 18 57.8262 Bin_18_48843712 18 61.7949 Bin_18_49484893 18 62.0242 Bin_18_49809132 18 64.6709 Bin_18_49910028 18 64.8992 Bin_18_50068425 18 68.0435 Bin_18_50316972 18 68.2708 Bin_18_50536265 18 73.7931 Bin_18_50741637 18 74.0193 Bin_18_51132698 18 75.1716 Bin_18_51665698 18 75.3979 Bin_18_51984629 18 75.6241 Bin_18_52088131 18 75.8504 Bin_18_52291944 18 76.5353 Bin_18_52540876 18 77.9311 Bin_18_52701882 18 81.0601 Bin_18_52769422 18 81.2874 Bin_18_52878750 18 81.5147 Bin_18_53051264 18 81.742 Bin_18_53184926 18 82.1986 Bin_18_53232059 18 82.4269 Bin_18_53327682 18 82.6552 Bin_18_53435741 18 83.1139 Bin_18_53510755 18 83.3422 Bin_18_53687396 18 83.801 Bin_18_54045286 18 84.4923 Bin_18_54538651 18 85.4183 Bin_18_54834056 18 94.5344 Bin_18_54896326 18 94.5344 Bin_18_54966693 18 94.768 Bin_18_55047193 18 95.0017 Bin_18_55130422 18 95.4712 Bin_18_55253203 18 95.7048 Bin_18_55452192 18 95.9385 Bin_18_55607897 18 96.646 Bin_18_55672207 18 96.8797 Bin_18_55774241 18 97.1133 Bin_18_56876848 18 97.347 Bin_19_97700 19 0 Bin_19_290587 19 2.9302 Bin_19_438926 19 3.1617 Bin_19_529660 19 3.3931 Bin_19_620210 19 7.1129 Bin_19_757690 19 7.3443 Bin_19_864075 19 8.0453 Bin_19_906972 19 13.7399 Bin_19_950857 19 14.925 Bin_19_1121913 19 15.1575 Bin_19_1285170 19 15.6227 Bin_19_1412205 19 15.8542 Bin_19_1602834 19 16.3171 Bin_19_1760423 19 17.2518 Bin_19_1931868 19 18.9112 Bin_19_2083605 19 19.6089 Bin_19_2247908 19 20.0719 Bin_19_2371105 19 23.5087 Bin_19_2638116 19 23.7391 Bin_19_3155686 19 28.8328 Bin_19_3458280 19 31.4923 Bin_19_3576679 19 31.7227 Bin_19_3724965 19 34.1284 Bin_19_4057397 19 34.3588 Bin_19_4348126 19 34.5892 Bin_19_5598357 19 34.8196 Bin_19_7604600 19 36.9741 Bin_19_8464321 19 38.3896 Bin_19_8982974 19 38.6189 Bin_19_17810421 19 38.8483 Bin_19_27693452 19 38.8483 Bin_19_29314383 19 45.661 Bin_19_29856418 19 45.8924 Bin_19_30287434 19 46.125 Bin_19_32119303 19 46.3576 Bin_19_34351489 19 46.8249 Bin_19_34827540 19 47.7684 Bin_19_35347314 19 48.7075 Bin_19_36215668 19 48.9389 Bin_19_36681323 19 49.4041 Bin_19_36769531 19 49.6355 Bin_19_36922173 19 49.867 Bin_19_37378481 19 50.8061 Bin_19_37884907 19 53.2234 Bin_19_38105613 19 53.4549 Bin_19_38283820 19 54.1559 Bin_19_38541662 19 54.621 Bin_19_38869220 19 59.1333 Bin_19_39104568 19 59.592 Bin_19_39221565 19 59.8203 Bin_19_39339889 19 60.0486 Bin_19_39482487 19 60.2769 Bin_19_39759205 19 60.5052 Bin_19_39995546 19 60.7335 Bin_19_40095980 19 60.7335 Bin_19_40169180 19 60.9608 Bin_19_40368301 19 61.4174 Bin_19_40550960 19 66.9678 Bin_19_40619823 19 67.4244 Bin_19_40758152 19 68.1125 Bin_19_40894800 19 70.484 Bin_19_41063760 19 70.7112 Bin_19_41214715 19 71.3993 Bin_19_41261870 19 71.856 Bin_19_41333451 19 72.0833 Bin_19_41663382 19 72.5399 Bin_19_41985301 19 80.3147 Bin_19_42070778 19 83.2306 Bin_19_42182320 19 83.46 Bin_19_42279944 19 83.6894 Bin_19_42402526 19 84.1502 Bin_19_42532243 19 84.6111 Bin_19_43651213 19 84.6111 Bin_19_44855295 19 84.6111 Bin_19_45006777 19 84.6111 Bin_19_45063625 19 84.8415 Bin_19_45145443 19 85.0719 Bin_19_45220389 19 86.9867 Bin_19_45272210 19 87.2182 Bin_19_45347398 19 87.2182 Bin_19_45579740 19 87.4486 Bin_19_45873137 19 87.679 Bin_19_46072909 19 88.1441 Bin_19_46282139 19 88.3756 Bin_19_46736159 19 94.6256 Bin_19_47136717 19 97.0198 Bin_19_47268001 19 97.7142 Bin_19_47403239 19 97.9436 Bin_19_47578081 19 98.4045 Bin_20_258988 20 0 Bin_20_635423 20 0.4608 Bin_20_782979 20 7.8439 Bin_20_828201 20 8.3047 Bin_20_909786 20 8.7656 Bin_20_993670 20 9.2264 Bin_20_1038242 20 9.4558 Bin_20_1178368 20 9.6851 Bin_20_1323636 20 13.3865 Bin_20_1541812 20 13.8473 Bin_20_1749971 20 14.0767 Bin_20_1835512 20 16.7362 Bin_20_2014491 20 16.9666 Bin_20_2419963 20 17.197 Bin_20_2835302 20 20.6338 Bin_20_2990586 20 21.3315 Bin_20_3085751 20 21.7945 Bin_20_5989195 20 22.2574 Bin_20_8908346 20 23.1921 Bin_20_15826689 20 23.4215 Bin_20_23442154 20 23.6509 Bin_20_25971349 20 23.8802 Bin_20_30473291 20 24.8106 Bin_20_33515326 20 34.8328 Bin_20_34042570 20 36.2416 Bin_20_34409282 20 37.41 Bin_20_34572655 20 39.3067 Bin_20_34681973 20 40.4751 Bin_20_34811507 20 40.936 Bin_20_34901637 20 41.1653 Bin_20_34993227 20 41.6262 Bin_20_35092639 20 41.8555 Bin_20_35401347 20 42.3164 Bin_20_35818576 20 43.4848 Bin_20_36001385 20 49.1208 Bin_20_36420200 20 54.7279 Bin_20_36860157 20 54.9573 Bin_20_37056604 20 58.1168 Bin_20_37418951 20 58.3462 Bin_20_37829099 20 59.5146 Bin_20_38123989 20 65.1218 Bin_20_38564938 20 65.8163 Bin_20_38954876 20 66.9902 Bin_20_39227462 20 67.2206 Bin_20_39520155 20 67.6836 Bin_20_39618797 20 67.914 Bin_20_39716568 20 67.914 Bin_20_40144236 20 71.0735 Bin_20_40616086 20 75.0423 Bin_20_40767359 20 75.2727 Bin_20_41044941 20 78.7094 Bin_20_42702399 20 79.8834 Bin_20_44268445 20 89.3885 Bin_20_44574295 20 89.858 Bin_20_44751381 20 90.8015 Bin_20_44853531 20 91.0341 Bin_20_45044429 20 91.5014 Bin_20_45171531 20 91.5014 Bin_20_45266993 20 91.7329 Bin_20_45525333 20 91.9643 Bin_20_45747227 20 93.8884 Bin_20_45866019 20 94.1209 Bin_20_46224051 20 94.3535 Bin_20_46559632 20 98.6138 Bin_20_46670539 20 98.8452 Bin_20_46847490 20 99.5462 Bin_20_47225115 20 103.5348 Bin_20_47561589 20 109.7847 !*********************************** Marker Types ******************************************************************** !Co-dominant marker: When heterozygote F1 is present, P1 is coded as 2, F1 is coded as 1, and P2 is coded as 0; Otherwise, P1 is coded as 2, and P2 is coded as 0. !Dominant marker: When heterozygote F1 is present, P1 and F1 are coded as 12, and P2 is coded as 0; Otherwise, P1 is coded as 2, and P2 is coded as 0. !Recessive markers: When heterozygote F1 is present, P1 is coded as 2, and F1 and P2 are coded as 10; Otherwise, P1 is coded as 2, and P2 is coded as 0. !Missing marker is coded as -1. Bin_1_1144296 2 0 2 2 2 2 2 2 2 2 2 2 0 2 2 2 0 2 2 2 2 2 0 0 2 2 2 2 2 2 2 2 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 0 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 0 2 -1 0 -1 2 2 0 2 2 0 2 0 2 2 2 2 2 2 2 2 2 0 2 2 2 2 2 2 0 2 2 2 0 2 2 2 0 0 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 0 2 2 2 2 2 2 2 2 0 2 2 0 2 2 0 2 2 2 2 2 2 2 2 -1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 0 2 2 2 0 2 2 2 0 2 2 0 2 2 2 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 2 2 2 2 2 2 -1 2 2 2 2 2 Bin_1_2316557 2 0 2 0 2 2 2 2 2 0 2 2 0 2 2 2 0 2 2 2 2 2 0 0 2 2 0 2 2 2 2 2 2 2 2 0 2 2 2 2 0 2 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 0 0 2 2 2 0 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 2 0 2 -1 0 -1 2 2 0 2 2 0 2 0 2 2 2 0 2 0 2 2 0 0 2 2 2 0 2 0 0 2 2 2 0 2 2 0 0 0 2 2 2 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 0 0 2 0 2 2 2 2 2 2 2 2 0 2 2 0 2 0 0 2 2 2 2 0 2 2 0 -1 0 2 2 2 0 2 2 2 2 2 2 2 2 2 2 0 2 2 0 0 2 2 2 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 2 0 2 2 2 2 -1 2 2 0 0 0 Bin_1_2529821 2 0 2 0 2 2 2 2 2 0 2 2 0 2 2 2 0 2 2 2 2 2 0 0 2 2 0 2 2 2 2 2 2 2 2 0 2 2 2 2 0 2 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 0 0 2 2 2 0 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 2 0 2 -1 0 -1 2 2 0 2 2 0 2 0 2 2 2 0 2 0 2 2 0 0 2 2 2 0 2 0 0 2 2 2 0 2 2 0 0 0 2 2 2 2 2 0 0 2 2 2 2 2 2 2 2 0 2 2 2 0 0 2 0 2 2 2 2 2 2 2 2 0 2 2 0 2 0 0 2 0 2 2 0 2 2 0 -1 0 2 2 0 0 2 2 2 2 2 2 2 2 2 2 0 2 2 0 0 2 2 2 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 2 0 2 2 2 2 -1 2 2 0 0 0 Bin_1_3371680 2 0 2 0 0 2 2 2 2 0 2 2 0 2 2 2 0 2 2 2 2 0 0 0 2 2 0 2 2 2 2 2 2 2 2 0 2 2 2 2 0 2 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 0 0 2 2 2 0 2 2 2 0 2 2 2 2 2 2 2 0 0 2 2 2 2 2 0 2 -1 0 -1 2 2 0 2 2 0 0 0 2 2 2 0 2 0 2 2 0 0 2 2 2 0 2 0 0 2 2 2 0 2 2 0 0 0 2 2 2 0 2 0 0 2 2 2 2 2 2 2 2 0 2 2 2 0 0 2 0 2 2 2 2 2 2 2 2 0 2 2 0 2 0 0 0 0 2 2 0 2 2 0 -1 0 2 2 0 0 2 2 2 2 2 0 2 2 2 2 0 2 2 0 0 2 2 2 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 2 0 2 2 2 2 -1 2 2 0 0 0 Bin_1_4083212 2 0 2 0 0 0 2 0 0 0 2 2 0 2 2 2 0 2 2 2 2 0 2 0 0 2 0 2 2 2 0 0 2 2 0 2 2 2 2 0 0 0 2 0 0 0 2 2 2 2 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 0 0 2 2 2 2 2 0 2 -1 2 -1 0 2 0 2 2 2 0 0 2 2 2 0 2 0 2 2 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 2 2 2 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 0 2 2 2 2 0 0 2 0 0 0 0 0 2 0 0 2 0 -1 0 2 0 0 0 0 2 0 2 0 0 2 0 2 0 0 0 2 0 0 2 2 0 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 0 0 2 2 2 2 -1 2 2 0 0 0 Bin_1_4299804 2 0 2 0 0 0 2 0 0 0 2 2 0 2 2 2 0 2 2 2 2 0 2 0 0 2 0 2 2 2 0 0 2 2 0 2 2 2 2 0 0 0 2 0 0 0 2 2 2 2 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 0 0 2 2 2 2 2 0 2 -1 2 -1 0 2 0 2 2 2 0 0 2 2 2 0 2 0 2 0 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 2 2 2 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 0 2 2 2 2 0 0 2 0 0 0 0 0 2 0 0 2 0 -1 0 0 0 0 0 0 2 0 2 0 0 2 0 2 0 0 0 2 0 0 2 2 0 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 0 0 2 2 2 2 -1 2 2 0 0 0 Bin_1_4761397 2 0 2 0 0 0 2 0 0 0 2 2 0 2 2 2 0 2 2 2 2 0 2 0 0 2 0 2 2 2 0 0 2 2 0 2 2 2 0 0 0 0 2 0 0 0 2 0 2 2 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 0 0 2 2 2 2 2 0 2 -1 2 -1 0 2 0 2 2 2 0 0 2 2 2 0 2 0 2 0 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 2 2 2 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 0 2 2 2 2 0 0 2 0 0 0 0 0 2 0 0 2 0 -1 0 0 0 0 0 0 2 0 2 0 0 2 0 2 0 0 0 2 0 0 2 2 0 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 0 0 2 2 2 2 0 2 2 0 0 0 Bin_1_5096644 2 0 2 0 0 0 2 0 0 0 2 2 0 2 2 2 0 2 2 2 2 0 2 0 0 2 0 2 2 2 0 0 2 2 0 2 2 2 0 0 0 0 2 0 0 0 2 0 2 2 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 0 0 2 2 2 2 2 0 0 -1 2 -1 0 2 2 2 2 2 0 0 2 2 2 0 2 0 2 0 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 2 2 2 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 0 2 2 2 2 0 0 2 0 0 0 0 0 2 0 0 2 0 -1 0 0 0 0 0 0 2 0 2 2 0 2 0 2 0 0 0 2 0 0 2 2 0 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 0 0 2 2 2 2 0 2 2 0 0 0 Bin_1_5321085 2 0 2 0 0 0 2 0 0 0 2 2 0 2 2 2 0 2 2 2 2 0 2 0 0 2 0 2 0 2 0 0 2 2 0 2 2 2 0 0 0 0 2 0 0 0 2 0 2 2 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 0 0 2 2 2 2 2 0 0 -1 2 -1 0 2 2 2 2 2 0 0 2 2 2 0 2 0 2 0 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 2 2 2 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 0 2 2 2 2 0 0 2 0 0 0 0 0 2 0 0 2 0 -1 0 0 0 0 0 0 2 0 2 2 0 2 0 2 0 0 0 2 0 0 2 2 0 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 -1 0 2 0 -1 2 2 0 0 2 2 2 2 0 2 2 0 0 0 Bin_1_6199346 2 0 2 0 0 0 2 0 0 0 2 2 0 2 2 2 0 2 2 2 2 0 2 0 0 2 0 2 0 2 0 0 2 2 0 2 2 2 0 0 0 0 2 0 0 0 2 0 2 2 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 0 0 2 2 2 2 2 0 0 -1 2 -1 0 2 2 2 2 2 0 0 2 2 2 0 2 0 2 0 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 2 2 2 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 0 2 2 2 2 0 0 2 0 0 0 0 0 2 0 0 2 0 -1 0 0 0 0 0 0 2 0 2 2 0 2 0 2 0 0 0 2 0 0 2 2 0 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 0 0 2 0 -1 2 2 0 0 2 2 2 2 0 2 2 0 0 0 Bin_1_8897534 2 0 2 0 0 0 2 0 0 0 2 2 0 2 2 2 0 2 2 2 2 2 2 0 0 2 0 0 0 2 0 0 2 2 0 2 2 2 0 0 0 0 2 2 0 0 2 0 2 2 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 0 0 2 2 2 2 2 0 0 -1 2 -1 0 2 2 2 2 2 0 0 2 2 2 0 2 0 2 0 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 2 2 2 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 0 2 2 2 2 0 0 2 0 0 0 0 0 2 0 0 2 0 -1 0 0 0 0 0 0 2 0 2 2 0 2 2 2 0 0 0 2 0 0 2 2 0 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 0 0 2 0 -1 2 2 0 0 2 2 2 2 0 2 2 0 0 0 Bin_1_11346193 2 0 2 0 0 0 2 0 0 0 2 2 2 2 2 2 0 2 2 2 2 2 2 0 0 2 0 0 0 2 2 0 2 2 0 2 2 2 0 2 0 0 2 2 0 0 2 0 2 0 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 0 0 2 2 2 2 2 0 0 -1 2 -1 2 2 2 2 2 0 2 0 2 2 2 0 2 0 2 0 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 -1 2 0 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 2 2 2 2 2 0 0 2 0 0 0 0 2 2 0 0 2 0 -1 2 0 0 0 0 0 2 2 2 2 0 2 2 2 0 0 2 2 0 0 2 2 0 0 2 2 0 2 2 0 0 2 2 2 2 2 2 0 0 0 2 0 -1 2 2 0 2 2 2 2 2 0 2 2 0 0 0 Bin_1_12905503 2 0 2 0 0 0 2 0 0 0 2 2 2 2 2 2 0 2 2 2 2 2 2 0 0 2 0 0 0 2 2 0 2 2 0 2 2 2 0 2 0 0 2 2 0 0 2 0 2 0 2 0 2 0 0 2 2 2 2 0 0 2 0 2 0 2 2 2 0 0 2 2 2 2 2 0 2 0 2 2 2 2 2 0 0 -1 2 -1 2 2 2 2 2 0 2 0 2 2 2 0 2 0 2 0 0 2 0 2 2 0 2 0 0 2 2 0 0 2 2 0 0 0 2 0 2 0 2 0 0 2 -1 2 0 2 2 2 2 0 2 0 2 0 0 2 0 2 0 2 2 2 2 2 2 2 2 0 0 2 0 0 0 0 2 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