User contributions
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- 09:04, 3 January 2024 (diff | hist) . . (+32) . . Slow wilting QTL (current)
- 09:04, 3 January 2024 (diff | hist) . . (+157) . . N File:Synteny.zip (A bundle of Python scripts and example files for: 1) Finding synteny regions of QTLs. 2) Identifying overlapping QTLs. 3) Visualizing results in SVG format.) (current)
- 07:28, 3 January 2024 (diff | hist) . . (+54) . . N Slow wilting QTL (Created page with "thumbnail")
- 07:25, 3 January 2024 (diff | hist) . . (+858) . . N File:ParentalPolymorphismSNPSelector.zip (This script is designed to process VCF files by skipping the header lines and then examining each line to check the genotypes in the 10th and 11th columns, which correspond to the maternal and paternal lines in our specific dataset. It selects SNPs whe...) (current)
- 07:19, 3 January 2024 (diff | hist) . . (+22) . . Bioinformatics (current)
- 07:02, 17 November 2023 (diff | hist) . . (+329) . . SK met (current)
- 19:05, 16 November 2023 (diff | hist) . . (0) . . N File:Example met.txt (current)
- 19:05, 16 November 2023 (diff | hist) . . (+10) . . N File:Bip example.txt (ICImapping) (current)
- 18:56, 16 November 2023 (diff | hist) . . (+19) . . N File:Vietnam KOICA.pptx (raw reset_to_snpEff) (current)
- 07:57, 22 March 2023 (diff | hist) . . (+3) . . Main Page (current)
- 07:13, 27 January 2022 (diff | hist) . . (0) . . Main Page
- 07:29, 19 February 2021 (diff | hist) . . (+66) . . Phewas (current)
- 07:24, 19 February 2021 (diff | hist) . . (+148) . . Phewas
- 07:23, 19 February 2021 (diff | hist) . . (+92) . . Phewas
- 07:21, 19 February 2021 (diff | hist) . . (+174) . . Phewas
- 07:08, 19 February 2021 (diff | hist) . . (+400) . . N Phewas (Created page with "[GWAS data collection] GRIN에서 soy50k로 찍은 GWAS data 수집 phenotype 있는 accession들만 vcf 정리 Plink 이용하여 IBD 계산후 0.98로 cut, missing이랑 het...")
- 07:04, 19 February 2021 (diff | hist) . . (+11) . . 2021 Hakyung Lab note (current)
- 04:57, 10 February 2021 (diff | hist) . . (+150) . . TIGAR (current)
- 04:54, 10 February 2021 (diff | hist) . . (+2) . . TIGAR
- 04:54, 10 February 2021 (diff | hist) . . (+257) . . TIGAR
- 06:59, 9 February 2021 (diff | hist) . . (+44) . . TIGAR
- 06:56, 9 February 2021 (diff | hist) . . (-19) . . TIGAR
- 06:53, 9 February 2021 (diff | hist) . . (+39) . . TIGAR
- 05:34, 9 February 2021 (diff | hist) . . (+81) . . TIGAR
- 02:53, 9 February 2021 (diff | hist) . . (+114) . . TIGAR
- 01:46, 9 February 2021 (diff | hist) . . (+43) . . TIGAR
- 08:22, 8 February 2021 (diff | hist) . . (+224) . . TIGAR
- 08:20, 8 February 2021 (diff | hist) . . (+658) . . TIGAR
- 08:06, 8 February 2021 (diff | hist) . . (+395) . . N TIGAR (Created page with "TIGAR는 PrediXcan 의 develop 버전? genotype 으로 expression을 impute 하는 단계 + gene based로 expression과 phenotype의 association을 계산하는 단계로 이...")
- 08:04, 8 February 2021 (diff | hist) . . (+9) . . N 2021 Hakyung Lab note (Created page with "TIGAR")
- 07:27, 14 September 2020 (diff | hist) . . (+152) . . HISAT2 pipeline (→sort/markdup) (current)
- 06:54, 14 September 2020 (diff | hist) . . (-12) . . HISAT2 pipeline (→sort/markdup)
- 06:54, 14 September 2020 (diff | hist) . . (+59) . . HISAT2 pipeline (→sort/markdup)
- 06:06, 14 September 2020 (diff | hist) . . (+18) . . HISAT2 pipeline
- 06:05, 14 September 2020 (diff | hist) . . (+237) . . N HISAT2 pipeline (Created page with "==mapping == /data1/program/hisat2/hisat2-2.2.1/hisat2 -q --phred33 -x /data1/ref/Gmax_275_v2.0.fa.hisat --summary-file SS2-2_1_hisat_summary -p 6 -1 {forward_input.fq.gz} -2...")
- 06:01, 14 September 2020 (diff | hist) . . (+20) . . 2020 Hakyung Lab note (current)
- 01:19, 4 June 2020 (diff | hist) . . (+22) . . QTL (current)
- 01:19, 4 June 2020 (diff | hist) . . (+65) . . N QTL (Created page with "=Where Synteny bloack data is= 244:/alima9002/synteny/Gm275_self#")
- 01:18, 4 June 2020 (diff | hist) . . (+7) . . N 2020 Hakyung Lab note (Created page with "QTL")
- 05:55, 7 February 2020 (diff | hist) . . (+502) . . 2018 Hakyung R command (current)
- 04:30, 11 July 2019 (diff | hist) . . (+133) . . TS GBS (current)
- 04:29, 11 July 2019 (diff | hist) . . (-192) . . TS GBS
- 02:24, 11 July 2019 (diff | hist) . . (-9) . . TS GBS
- 02:23, 11 July 2019 (diff | hist) . . (+6) . . TS GBS (→바코드에 따라 read 분류하기)
- 02:23, 11 July 2019 (diff | hist) . . (+10) . . TS GBS (→processing)
- 02:21, 11 July 2019 (diff | hist) . . (-10) . . TS GBS (→processing)
- 02:21, 11 July 2019 (diff | hist) . . (+4) . . TS GBS (→바코드 분류하기)
- 02:19, 11 July 2019 (diff | hist) . . (+1) . . TS GBS (→바코드 분류하기)
- 02:19, 11 July 2019 (diff | hist) . . (+2) . . TS GBS (→바코드 분류하기)
- 02:19, 11 July 2019 (diff | hist) . . (+2) . . TS GBS (→Where data came from)
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