Difference between revisions of "Bin mapping"
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KangHeum Cho (Talk | contribs) (Created page with "=== Basic principle === 기본이 되는 논문: High-throughput genotyping by whole-genome resequencing, Huang et al., Genome res., 2009 * ''SNPs between the two genome se...") |
Revision as of 02:02, 6 July 2020
Basic principle
기본이 되는 논문: High-throughput genotyping by whole-genome resequencing, Huang et al., Genome res., 2009
- SNPs between the two genome sequences were identified as potential markers for genotyping.
- 처음 마커의 모집단은 모부본 사이의 SNP
- 왜냐하면 모부본은 높은 시퀀싱 퀄리티를 가지고 있기 때문
Procedures
WD: 244:/hayasen/chojam/bin_mapping
하위 파일:
1) variant.vcf -> /hayasen/Workspace/YoonMY/variant.vcf 청자3호, 부석의 resequencing 파일로 variant calling한 것
2) UV.new.chojam.variant.vcf -> ../new_GBS/UV.new.chojam.variant.vcf CB population GBS data
