Difference between revisions of "MCScanX2figure"
From Crop Genomics Lab.
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== mcscanx2figure.py == | == mcscanx2figure.py == | ||
| − | 63:/ | + | 63:/home/alima90/py/mcscanx2figure.py |
'''<big>Visualizing tool for MCScanX synteny block using SVG</big> | '''<big>Visualizing tool for MCScanX synteny block using SVG</big> | ||
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| python mcscanx2figure.py config_file mcscanx_file(collinearity) block_number > output.svg | | python mcscanx2figure.py config_file mcscanx_file(collinearity) block_number > output.svg | ||
|} | |} | ||
| + | |||
| + | === Config file === | ||
| + | MCScanX2figure config file example | ||
| + | |||
| + | [[File:MC2F config.txt]] | ||
== mcscanx2figure_schematic.py == | == mcscanx2figure_schematic.py == | ||
Latest revision as of 06:19, 17 December 2014
Contents |
mcscanx2figure.py
63:/home/alima90/py/mcscanx2figure.py
Visualizing tool for MCScanX synteny block using SVG
README
| Command |
|---|
| python mcscanx2figure.py config_file mcscanx_file(collinearity) block_number > output.svg |
Config file
MCScanX2figure config file example
mcscanx2figure_schematic.py
63:/home/alima90/py/mcscanx2figure_schematic_v1.1.py
Visualizing tool for MCScanX synteny block as schematic figure using SVG
README
| Command |
|---|
| python mcscanx2figure_schematic.py config_file mcscanx_file(collinearity) block_number > output.svg |
Config file
MCScanX2figure_schematic config file example
