Samtools

From Crop Genomics Lab.

Jump to: navigation, search

FLAG

samtools view -F 14 infile.bam | grep -v " = " > outfile.sam - Extracting paired-end reads sitting in different chromosomes

Retrieved from "http://plantgenomics.snu.ac.kr/mediawiki-1.21.3/index.php?title=Samtools&oldid=188"