Difference between revisions of "Tips kang"

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Line 6: Line 6:
 
=TEXT(2.2323,"(0.00)")<br />
 
=TEXT(2.2323,"(0.00)")<br />
 
(2.23)<br />
 
(2.23)<br />
 +
 +
'''Softwares'''<br />
 +
''Deconseq''<br />
 +
63:/data/program/deconseq-standalone-0.4.3 <br />
 +
/usr/bin/perl deconseq.pl -keep_tmp_files -f 800_both.fq -dbs bact,vir,arch -dbs_retain gmax <br />
  
 
<references />
 
<references />

Revision as of 03:27, 28 February 2014

Fisher's exact test in python
from scipy import stats
oddsratio, pvalue = stats.fisher_exact([[A,B], [C, D]]) [1]

Excel
=TEXT(2.2323,"(0.00)")
(2.23)

Softwares
Deconseq
63:/data/program/deconseq-standalone-0.4.3
/usr/bin/perl deconseq.pl -keep_tmp_files -f 800_both.fq -dbs bact,vir,arch -dbs_retain gmax

  1. scipy, fisher's exact