Tips kang
From Crop Genomics Lab.
Revision as of 06:21, 1 March 2014 by Yang Jae Kang (Talk | contribs)
Python
Fisher's exact test
from scipy import stats
oddsratio, pvalue = stats.fisher_exact([[A,B], [C, D]]) [1]
Excel
=TEXT(2.2323,"(0.00)")
(2.23)
Softwares
Deconseq [2]
Illumina read의 contamination을 확인한다.
63:/data/program/deconseq-standalone-0.4.3
/usr/bin/perl deconseq.pl -keep_tmp_files -f 800_both.fq -dbs bact,vir,arch -dbs_retain gmax
추천 논문
Paterson, A.H., M. Freeling, H. Tang and X. Wang. 2010. Insights from the comparison of plant genome sequences. Annual Review of Plant Biology 61: 349-372. [3]
