Difference between revisions of "2017 Taeyoung Lab note"

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(Created page with "== 2017 1.2 == === Ongoing === ==== Jatropha transcriptome Trinity assemble ==== ==== Cdhit ==== {| class="wikitable" |- | 193:/data2/alima90/program/cdhit/cd-hit -i Y.cds.f...")

Revision as of 04:32, 2 January 2017

== 2017 1.2

==

Contents

Ongoing

Jatropha transcriptome Trinity assemble

Cdhit

193:/data2/alima90/program/cdhit/cd-hit -i Y.cds.fa -M 10000 -o Y.cds.fa.cdhit -T 5

UV GBS mapping (w/ joinmap)

KaKs calculation using scripts provided by MCscanX

244 :python /alima9002/63_backup/Jatropha/CDS/run.kaks.py