User contributions
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- 05:44, 17 July 2014 (diff | hist) . . (+15) . . Primer3
- 05:43, 17 July 2014 (diff | hist) . . (+355) . . N Primer3 (Created page with "SEQUENCE_ID= SEQUENCE_TEMPLATE= SEQUENCE_TARGET=4084,9 PRIMER_TASK=pick_pcr_primers PRIMER_PICK_LEFT_PRIMER=1 PRIMER_PICK_INTERNAL_OLIGO=1 PRIMER_PICK_RIGHT_PRIMER=1 PRIMER_OP...")
- 07:52, 10 July 2014 (diff | hist) . . (+34) . . Prediction pipeline (current)
- 05:31, 23 June 2014 (diff | hist) . . (+94) . . Re-sequencing
- 02:03, 5 June 2014 (diff | hist) . . (+19) . . Bioinformatics
- 04:04, 27 May 2014 (diff | hist) . . (+11) . . Re-sequencing
- 04:04, 27 May 2014 (diff | hist) . . (+206) . . Re-sequencing
- 08:18, 13 May 2014 (diff | hist) . . (+13) . . Bioinformatics
- 07:45, 13 May 2014 (diff | hist) . . (+566) . . N Ggplot2 (Created page with "== Scatter plot == {| class="wikitable" |- | ggplot(dataset,aes(Ks,Ka)) + geom_point(size=1.5,alpha=0.2) + geom_point(aes(colour=KaKs),alpha=0.2)+scale_colour_gradient2(limits...") (current)
- 07:46, 25 April 2014 (diff | hist) . . (0) . . N File:Mungbean blast.jpg (current)
- 07:37, 17 April 2014 (diff | hist) . . (+551) . . Prediction pipeline
- 05:15, 17 April 2014 (diff | hist) . . (+20) . . Bioinformatics
- 08:50, 11 April 2014 (diff | hist) . . (-14) . . MCScanX2figure
- 08:50, 11 April 2014 (diff | hist) . . (+84) . . MCScanX2figure
- 08:46, 11 April 2014 (diff | hist) . . (+31) . . MCScanX2figure
- 08:45, 11 April 2014 (diff | hist) . . (-221) . . MCScanX2figure
- 08:44, 11 April 2014 (diff | hist) . . (+1,939) . . N MCScanX2figure (Created page with "== mcscanx2figure.py == 63:/data1/alima90/py/mcscanx2figure.py '''<big>Visualizing tool for MCScanX synteny block using SVG</big> ''' ##README ##command ##python mcscanx2fi...")
- 08:31, 11 April 2014 (diff | hist) . . (+20) . . Taeyoung Lee
- 09:09, 25 March 2014 (diff | hist) . . (+392) . . Prediction pipeline
- 07:29, 25 March 2014 (diff | hist) . . (-4) . . Prediction pipeline
- 07:29, 25 March 2014 (diff | hist) . . (+12) . . Prediction pipeline
- 04:52, 24 March 2014 (diff | hist) . . (+577) . . N Prediction pipeline (Created page with "# Whole reads were mapped against reference genome # Both unmapped reads retrieve using following command {| class="wikitable" |- | samtools view –hb –f 12 –F 256 input....")
- 10:50, 21 March 2014 (diff | hist) . . (+34) . . Taeyoung Lee
- 10:50, 21 March 2014 (diff | hist) . . (+23) . . N Structural variation (Created page with "Prediction pipeline") (current)
- 10:29, 21 March 2014 (diff | hist) . . (+132) . . N Samtools (Created page with "==FLAG== samtools view -F 14 infile.bam | grep -v " = " > outfile.sam - Extracting paired-end reads sitting in different chromosomes") (current)
- 06:50, 11 March 2014 (diff | hist) . . (+13) . . Bioinformatics
- 07:47, 10 March 2014 (diff | hist) . . (+7) . . Tuxedo pipeline
- 07:46, 10 March 2014 (diff | hist) . . (+1,284) . . N Tuxedo pipeline (Created page with "===Step 1. fastq dump === fastq-dump -A SRR203363 SRR203363.sra -A $sradata_accession $sra_data.sra if paired-end sequence file were used, we should use --split-3 optio...")
- 07:42, 10 March 2014 (diff | hist) . . (+19) . . N RNA-seq (Created page with "Tuxedo pipeline")
- 10:19, 7 March 2014 (diff | hist) . . (+43) . . Taeyoung Lee (→Docs)
- 10:19, 7 March 2014 (diff | hist) . . (+15) . . Rhizobium (current)
- 10:18, 7 March 2014 (diff | hist) . . (+1,798) . . N Enrichment and Isolation of Rhizobium (Created page with "== Protocol == === Materials === Agar, K2HPO4, Mannitol, Yeast extract, MgSO4·H2O, NaCl, beakers, flasks, graduated cylinders, innoculating loops, test tubes, aluminium foil,...") (current)
- 08:18, 7 March 2014 (diff | hist) . . (-6) . . Rhizobium (→Enrichment and Isolation of Rhizobium)
- 08:18, 7 March 2014 (diff | hist) . . (+43) . . N Rhizobium (Created page with "== Enrichment and Isolation of Rhizobium ==")
- 07:33, 3 March 2014 (diff | hist) . . (+10) . . Mini prep (→Reaction Protocol) (current)
- 07:30, 3 March 2014 (diff | hist) . . (+15) . . Taeyoung Lee (→Docs)
- 05:40, 20 February 2014 (diff | hist) . . (+10) . . Taeyoung Lee (→Docs)
- 05:39, 20 February 2014 (diff | hist) . . (+152) . . N SAS (Created page with "The program for statistical analysis ==Example== Stability Analysis Equality Analysis") (current)
- 05:37, 20 February 2014 (diff | hist) . . (0) . . N File:SAS stability.docx (current)
- 05:37, 20 February 2014 (diff | hist) . . (0) . . N File:SAS equality.docx (current)
- 05:44, 14 February 2014 (diff | hist) . . (+53) . . Taeyoung Lee
- 10:18, 13 February 2014 (diff | hist) . . (+16) . . Taeyoung Lee (→Contribute)
- 10:15, 13 February 2014 (diff | hist) . . (+13) . . Taeyoung Lee
- 10:14, 13 February 2014 (diff | hist) . . (+11) . . Taeyoung Lee (→Docs)
- 10:14, 13 February 2014 (diff | hist) . . (+1,094) . . N Julia (Created page with "One of programming language == Docs == Docs for Julia == Python vs Julia == {| class="wikitable" |- ! Python !! Julia |- | print a || print(a)...") (current)
- 09:16, 13 February 2014 (diff | hist) . . (+14) . . N File:Julia.pdf (docs for julia) (current)
- 09:14, 13 February 2014 (diff | hist) . . (+12) . . Taeyoung Lee (→Docs)
- 09:02, 13 February 2014 (diff | hist) . . (+2) . . Taeyoung Lee (→Docs)
- 09:02, 13 February 2014 (diff | hist) . . (0) . . Taeyoung Lee (→Docs)
- 09:01, 13 February 2014 (diff | hist) . . (-1) . . Taeyoung Lee (→Docs=)
- 09:01, 13 February 2014 (diff | hist) . . (+72) . . Taeyoung Lee
- 08:59, 11 February 2014 (diff | hist) . . (+36) . . Mungbean transformation (current)
- 08:55, 11 February 2014 (diff | hist) . . (+1,491) . . N Mungbean transformation (Created page with "== Protocol == # Prepare binary vector ex) pMDC 43 # Vector are inserted into Agrobacterium competent cell by heat shock method # Spreading them on LB agar media with an...")
- 08:14, 11 February 2014 (diff | hist) . . (+483) . . N Antibiotics (Created page with "== Working Concentration == {| class="wikitable" |- ! Antibiotics !! Stringent plasmids !! Relaxed Plasmids |- | Ampicillin || 20 ug/ml || 50 ug/ml |- | Carbenicillin || 20 ug...") (current)
- 07:21, 11 February 2014 (diff | hist) . . (+283) . . N Heat shock (Created page with "Protocol for Transformation == Reaction Protocol == # Prepare competent cell(100ul aliquot) + 10ul Vector with insert gene # Mixture tube(110ul) in ice 20 min for ligation # H...") (current)
- 06:34, 11 February 2014 (diff | hist) . . (+1,537) . . N Mini prep (Created page with "<big><big><big>'''Plasmid DNA mini-prep (Manual methods) '''</big></big></big> == Reagent Set up == === Alkaline lysis solution 1 (4°C store) === {| class="wikitable" |- ! ...")
- 05:42, 30 December 2013 (diff | hist) . . (0) . . N File:Mungbean FTP fix.jpg (current)
- 05:42, 30 December 2013 (diff | hist) . . (0) . . N File:Mungbean Jbrowse fix.jpg (current)
- 05:14, 30 December 2013 (diff | hist) . . (+16) . . N File:Mungbean FTP.jpg (Mungbean_FTP.jpg) (current)
- 06:10, 6 December 2013 (diff | hist) . . (0) . . N File:Jatropha Jbrowse.jpg (current)
- 02:33, 25 November 2013 (diff | hist) . . (-11) . . Python (current)
- 02:32, 25 November 2013 (diff | hist) . . (+28) . . Python
- 02:32, 25 November 2013 (diff | hist) . . (+17) . . Python
- 02:31, 25 November 2013 (diff | hist) . . (+201) . . N Python (Created page with "ppt for python study File:Python study introduction.pptx File:Python study 1st day.pptx File:Python study 2nd day.pptx File:Python study 3rd day.pptx File:P...")
- 02:27, 25 November 2013 (diff | hist) . . (0) . . N File:Python study 4th day.pptx (current)
- 02:27, 25 November 2013 (diff | hist) . . (0) . . N File:Python study 3rd day.pptx (current)
- 02:26, 25 November 2013 (diff | hist) . . (0) . . N File:Python study 2nd day.pptx (current)
- 02:26, 25 November 2013 (diff | hist) . . (0) . . N File:Python study 1st day.pptx (current)
- 02:26, 25 November 2013 (diff | hist) . . (0) . . N File:Python study introduction.pptx (current)
- 06:24, 21 November 2013 (diff | hist) . . (-32) . . Dpkg error (current)
- 06:23, 21 November 2013 (diff | hist) . . (+407) . . N Dpkg error (Created page with "dpkg error is due to packages which were not fully installed we can see the packages have problem by followed command {| class="wikitable" |- | '''dpkg -l | grep -v ^ii''' ...")
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